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Publications

Monitoring key epidemiological parameters of SARS-CoV-2 transmission.

Kraemer MUG. et al, (2021), Nat Med

Progress and challenges in virus genomic epidemiology.

Hill V. et al, (2021), Trends Parasitol

Generation and transmission of interlineage recombinants in the SARS-CoV-2 pandemic.

Jackson B. et al, (2021), Cell, 184, 5179 - 5188.e8

A mechanistic evolutionary model explains the time-dependent pattern of substitution rates in viruses.

Ghafari M. et al, (2021), Curr Biol

Global disparities in SARS-CoV-2 genomic surveillance.

Brito AF. et al, (2021), medRxiv

Vaccine nationalism and the dynamics and control of SARS-CoV-2.

Wagner CE. et al, (2021), Science

Neutralisation of SARS-CoV-2 lineage P.1 by antibodies elicited through natural SARS-CoV-2 infection or vaccination with an inactivated SARS-CoV-2 vaccine: an immunological study.

Souza WM. et al, (2021), Lancet Microbe

SARS-CoV-2 Variants of Interest and Concern naming scheme conducive for global discourse.

Konings F. et al, (2021), Nat Microbiol

Identification of site-specific evolutionary trajectories shared across human betacoronaviruses

Escalera-Zamudio M. et al, (2021)

Are skyline plot-based demographic estimates overly dependent on smoothing prior assumptions?

Parag KV. et al, (2021), Syst Biol

Multiplex qPCR discriminates variants of concern to enhance global surveillance of SARS-CoV-2.

Vogels CBF. et al, (2021), PLoS Biol, 19

Sensitivity of SARS-CoV-2 B.1.1.7 to mRNA vaccine-elicited antibodies

Collier DA. et al, (2021), Nature, 593, 136 - 141

"Kankasha" in Kassala: A prospective observational cohort study of the clinical characteristics, epidemiology, genetic origin, and chronic impact of the 2018 epidemic of Chikungunya virus infection in Kassala, Sudan.

Bower H. et al, (2021), PLoS Negl Trop Dis, 15

Global prevalence and phylogeny of hepatitis B virus (HBV) drug and vaccine resistance mutations.

Mokaya J. et al, (2021), J Viral Hepat

Partial immunity and SARS-CoV-2 mutations-Response.

Saad-Roy CM. et al, (2021), Science, 372, 354 - 355

Genomics and epidemiology of the P.1 SARS-CoV-2 lineage in Manaus, Brazil.

Faria NR. et al, (2021), Science

Genomic epidemiology of SARS-CoV-2 transmission lineages in Ecuador.

Gutierrez B. et al, (2021), medRxiv

Epidemiological and evolutionary considerations of SARS-CoV-2 vaccine dosing regimes.

Saad-Roy CM. et al, (2021), Science

Genomics and epidemiology of a novel SARS-CoV-2 lineage in Manaus, Brazil.

Faria NR. et al, (2021), medRxiv

Local Transmission of SARS-CoV-2 Lineage B.1.1.7, Brazil, December 2020.

Claro IM. et al, (2021), Emerg Infect Dis, 27, 970 - 972

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