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Publications

Genetic diversity, recombination and cross-species transmission of a waterbird gammacoronavirus in the wild.

François S. et al, (2023), J Gen Virol, 104

Genomic assessment of invasion dynamics of SARS-CoV-2 Omicron BA.1.

Tsui JL-H. et al, (2023), Science, 381, 336 - 343

Dispersal patterns and influence of air travel during the global expansion of SARS-CoV-2 variants of concern.

Tegally H. et al, (2023), Cell, 186, 3277 - 3290.e16

The evolutionary history of hepaciviruses.

Li YQ. et al, (2023), bioRxiv

Identification of evolutionary trajectories shared across human betacoronaviruses.

Escalera-Zamudio M. et al, (2023), Genome Biol Evol

Investigation of hospital discharge cases and SARS-CoV-2 introduction into Lothian care homes

Cotton S. et al, (2023), Journal of Hospital Infection, 135, 28 - 36

Trends and spatiotemporal patterns of arboviral spread in Mexico and Central America

Gutierrez B. et al, (2023)

Bidirectional movement of emerging H5N8 avian influenza viruses between Europe and Asia via migratory birds since early 2020.

Zhang G. et al, (2023), Mol Biol Evol

Global disparities in SARS-CoV-2 genomic surveillance.

Brito AF. et al, (2022), Nat Commun, 13

Seasonal dynamics of the wild rodent faecal virome.

Raghwani J. et al, (2022), Mol Ecol

Impact of host age on viral and bacterial communities in a waterbird population.

Hill SC. et al, (2022), ISME J

Evolutionary features of a prolific subtype of avian influenza A virus in European waterfowl

Wille M. et al, (2022), VIRUS EVOLUTION, 8

Endogenous viral elements in shrew genomes provide insights into Pestivirus ancient history.

Li YQ. et al, (2022), Mol Biol Evol

Urgent need for a non-discriminatory and non-stigmatizing nomenclature for monkeypox virus.

Happi C. et al, (2022), PLoS Biol, 20

Context-specific emergence and growth of the SARS-CoV-2 Delta variant.

McCrone JT. et al, (2022), Nature

SARS-CoV-2 lineage dynamics in England from September to November 2021: high diversity of Delta sub-lineages and increased transmissibility of AY.4.2.

Eales O. et al, (2022), BMC Infect Dis, 22

Comparing the evolutionary dynamics of predominant SARS-CoV-2 virus lineages co-circulating in Mexico

Castelán-Sánchez H. et al, (2022)

“Comparing the evolutionary dynamics of predominant SARS-CoV-2 virus lineages co-circulating in Mexico”

Castelán-Sánchez HG. et al, (2022)

Emergence of SARS-CoV-2 Omicron lineages BA.4 and BA.5 in South Africa.

Tegally H. et al, (2022), Nat Med

Emergence and widespread circulation of a recombinant SARS-CoV-2 lineage in North America.

Gutierrez B. et al, (2022), Cell Host Microbe

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