Professor of Theoretical Epidemiology
- Harassment Officer
My main area of interest is the evolution of diversity in pathogens, with particular reference to the infectious disease agents that are responsible for malaria, influenza and bacterial meningitis. I use simple mathematical models to generate new hypotheses regarding the processes that determine the population structure of these pathogens. I work closely with laboratory and field scientists both to develop these hypotheses and to test them.
I have an interest in the public understanding of science and also in the connections between science and literature at the level of language and narrative.
EPINEST, an agent-based model to simulate epidemic dynamics in large-scale poultry production and distribution networks.
Pinotti F. et al, (2024), PLoS Comput Biol, 20
Darwin review: the evolution of virulence in human pathogens.
Gupta S., (2024), Proc Biol Sci, 291
Shifting patterns of dengue three years after Zika virus emergence in Brazil.
Pinotti F. et al, (2024), Nat Commun, 15
The metabolic, virulence and antimicrobial resistance profiles of colonising Streptococcus pneumoniae shift after PCV13 introduction in urban Malawi.
Obolski U. et al, (2023), Nat Commun, 14
Evolution of pathogen virulence: Studying the complex interplay of pathogen interactions, virulence and transmission helps us understand how they evolve and spread.
Gupta S., (2023), EMBO Rep